New sequencing data is really exciting, but most analysis workflows have many steps to get from raw sequencing data to results. Today, we will work to understand what k-mers are and how we can use them to generate quick insights or find contamination from sequencing data ranging from raw RNA-seq reads to genomes and metagenomes.
Presentation: https://angus.readthedocs.io/en/2019/sourmash.html
Recording: https://www.youtube.com/watch?v=1kWRDoF0Lyw
Presenter: @luizirber